Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889472.1_cds_XP_016444184.1_39273
CDS Infomation

[gene=LOC107769478] [db_xref=GeneID:107769478] [protein=CO(2)-response secreted protease-like] [frame=2] [partial=5'] [protein_id=XP_016444184.1] [location=complement(join(42888..43459,43732..43954,44655..44769,44924..45166,45445..45551,46150..46708,47279..47390,47567..47731,48294..>48391))] [gbkey=CDS]
Sequence

GAAGAAAGTGAGAGAATCTCAGTGAGGCATTCCTATCATCATGCTTATAGGGGCTTTTGT
TCCTTGCTTACAGAGGACGAAGCCATCCTATTATCAGGTCATGAGGAGGTTGTATCAGTT
TTTCCAGATCCCGTTCTTCAACTTCACACAACACGCTCCTGGGATTTTTTGGGTCTTGAA
TCTTCTTATTATTCCAGATCCTCTGGCTATCACTACAAGCATGGTTCATCTTTTGATGTT
ATTATTGGAGTTATTGACACAGGCATATGGCCCGAGTCACCTAGTTTTGATGACCAACAT
ATTGGTAAAGTACCATCAAGATGGAAAGGAGTCTGCATGGAAGGATTTGACTTCTACAAG
TCAAACTGCAATAGGAAGTTGATAGGAGCAAGGTTTTACAATATTGAAGATCAAGAGTCC
ACCTTCACAAAATTACCTAACATTAGCACTACAATACCATCAAAACCAAATGGAACACCA
AGGGACAAAGTAGGGCATGGAACAAACACAGCTTCAATAGCAGCAGGTGCAATTGTCCCT
AATGCCAATTACTATGGCCTAGCAAATGGCACAGCTAGGGGAGGGTTACCTTCTGCTAGG
ATTGCAACTTACAAAGCATGTTCAGAAGGAAATTGTCAAGGCTCTGCAATACTCAAAGCT
ATTGATGATGCAATTAAAGATGGAGTTGACATTATTTCCATTTCCATTGGGAGAAGTTTT
GTGTTTCAAACTGACTTTAAAGATGATCCTATTGCCATTGGGGCTTTTCATGCTGCTGAA
AGAGGAGTTGTGGTTGTTTGTTCTGCTGGGAATGAAGGACCTGATCCTTACACTGTTACC
AACTCTGCTCCCTGGATTTTCACTGTTGCTGCTTCTACTATTGATAGAAAATTTCAGTCC
ACTATTGTTCTGGGAAACAATGTCTCTTTGAAGGGATCAGGAATAAGTTACAATCCTACT
GGTCGCTCTCGCTCCAGAACTTATCCCCTTGCTTTCGGTGAAAACATTCCTTTCCACCCC
TCGTTAACTTCTCAAGCCAGGAATTGTATGCCAGGGTCATTGGATGCTAAAAGAGTTGCC
GGGAAAATAATTGTTTGCATGAATGATGACTGGACAATATCAAGAGAAATCAAGAAATTG
GTTGTGCAAGATGCCAATGCAAAGGGTCTGATTTTAATTGACGAGGCAGAGAAACGTTCA
CCATTTGATTCAGGCAACTTCCCCTTTGCTGAAGTTGGAAAGTTGCCTGGGGCTCAAATT
CTTCAATATATTAATTCCTCCCAGAACCCATTGGCAACTATATTTCCGGCAAATGAGATT
CGAAGGTTTAAGCCAGCTCCAGTAGTCGCAGATTTTTCTTCACGCGGACCCGCAACACTA
ACCGAAAATATTCTTAAGCCTGATATAAGTGCTCCTGGTGTTGGCATATTATCGGCAATG
ATTCCAAAGGTTGATGAAGTGAGTAGTAATCTTTTACCAGAAAAAAAATCAACATCCTTA
TTTGGCATCACATCTGGAACATCTATGGCCTGTCCACATGTTACTGGAGCTATGTCCTTC
ATTAAATCAATACACCGTACATGGAGCTTCTCAATGATCAAATCTGCAATCATGACAACA
GCAACAGTATCCAACAATTTGAGGAAGCACTTGACAAACACGTCAGGTCTTTATTCAAAT
CCACATGAAATAGGTGCTGGGGAATTAAGCCCAATTAAAGCTCTAGATCCAGGGTTAGTA
TTTGAAACGACCATGACTGACTACTACAACTTCCTATGTTATTACGGGTACAAAGAAAAA
CAACTTAGATTAGTAGCATCAAAGAATTATAAGAATTTCGATTGCCCAAGAAATGCTAGT
ACTAGTAAAAAGGAACTCATATCAAACATAAATTACCCTTCAATCTCTATAGAAAAACTT
AAGCAAAATCAGGGGGTTGTGAAAGTGAAAAGAGTTGCGACGAATGTTGGTTCAGATCGA
AATGCCACGTATACTTCTTCAACCATTGCTCCACCTGGTTTGGTTGTTAGGGTTTCTCCG
AAAAAGATTGTCTTTGTGAAAGGAATAAAGAAAGCTTCTTTTGAAATCTCATTTGATGGT
AAGAAAGCATCAAAGGGTTACAATTTTGGGATTATAACGTGGTCGGATGGCTCTCATAAA
GTTCAGATGATATTTGCAGTCAACATTGAATAA

Peptide Sequence

PEP ID

XP_016444184.1
PEP Infomation

PREDICTED: CO(2)-response secreted protease-like, partial [Nicotiana tabacum]
Sequence

EESERISVRHSYHHAYRGFCSLLTEDEAILLSGHEEVVSVFPDPVLQLHTTRSWDFLGLE
SSYYSRSSGYHYKHGSSFDVIIGVIDTGIWPESPSFDDQHIGKVPSRWKGVCMEGFDFYK
SNCNRKLIGARFYNIEDQESTFTKLPNISTTIPSKPNGTPRDKVGHGTNTASIAAGAIVP
NANYYGLANGTARGGLPSARIATYKACSEGNCQGSAILKAIDDAIKDGVDIISISIGRSF
VFQTDFKDDPIAIGAFHAAERGVVVVCSAGNEGPDPYTVTNSAPWIFTVAASTIDRKFQS
TIVLGNNVSLKGSGISYNPTGRSRSRTYPLAFGENIPFHPSLTSQARNCMPGSLDAKRVA
GKIIVCMNDDWTISREIKKLVVQDANAKGLILIDEAEKRSPFDSGNFPFAEVGKLPGAQI
LQYINSSQNPLATIFPANEIRRFKPAPVVADFSSRGPATLTENILKPDISAPGVGILSAM
IPKVDEVSSNLLPEKKSTSLFGITSGTSMACPHVTGAMSFIKSIHRTWSFSMIKSAIMTT
ATVSNNLRKHLTNTSGLYSNPHEIGAGELSPIKALDPGLVFETTMTDYYNFLCYYGYKEK
QLRLVASKNYKNFDCPRNASTSKKELISNINYPSISIEKLKQNQGVVKVKRVATNVGSDR
NATYTSSTIAPPGLVVRVSPKKIVFVKGIKKASFEISFDGKKASKGYNFGIITWSDGSHK
VQMIFAVNIE

Transcript Sequence

Gene sequence data has not been registered.